Category Archives: MicroFarm

Onions Update Field Walk

LandWISE MicroFarm
21 Ruahapia Rd, Waipatu, Hastings
Monday 11 December 2:00pm

In our final year of “Benchmarking Onions” we have again planted a crop at the MicroFarm. It went into a suitably moist soil, emerged reasonably evenly but has shown increasing variation. We now have very good areas and very disappointing areas. 

We’ve mapped the crop with our CoverMap system again this season so we can compare 2015-16, 2016-17 and 2017-18 growth patterns. Are there areas that consistently perform better or worse? What is driving the variation we see?

We also have a few different varieties we are tracking to see how canopy development fits our web calculator. We want to know if the same calculations can be applied to phone images or if variety-based tweeks are necessary.

In a couple of fertiliser application trials we comparing standard and late application because we understand most nitrogen is taken up at or after bulbing. And based on our mapping, we are comparing the effects of full and half rates on areas where canopy cover is low. Maybe we can cut back, save fertiliser and leaching and get the same yield with improved bulb quality.

Come along and see for yourself!

Note: This field walk follows the HotGrass electric weeding demonstration, see more here>

Our Onion Research is in conjunction with Plant and Food Research. It is funded by Onions NZ and the Sustainable Farming Fund. This season we are being aided by Apatu Farms who are helping with field operations and harvest and we are very grateful for their support.


MicroFarm Update

Some important “Thank you”s:

For the last three seasons, Gerry Steenkamer and family have supported our onion growing and the OnionsNZ Sustainable Farming Fund project on Benchmarking Variability. Without their help we wouldn’t have even had a crop and seen the variability in it in the first place. Since then we’ve been dependent on them for prep and planting, harvest and marketing the crops we’ve produced. We are extremely grateful for that. Many, many thanks Gerry, Jenny, John and all the staff who have done great work for us. It has been a privilege.

This year Apatu Farms have come on board to help us with our final year of the Benchmarking project. So, many thanks too Mark and Paul and your staff who are helping us this season. We especially appreciate fitting our very small but time consuming job into your schedule during a very difficult planting season. With seven different varieties planted, it took even longer than normal, but we are thrilled with the job done.

Two years ago we borrowed a tractor from Mike Glazebrook for a few months. After two seasons, we’ve returned it but also thank Mike and Nigel for their help with MicroFarm activities. The main role of this machine was carrying our sensors, then towing a small spray trailer over our onions. It was an ideal fit, but is now needed again at its true home! Thanks Mike and BioRich.

To replace the BioRich tractor we’ve picked up an older John Deere 2030. To fit the Apatu Farms standard bed we’ve been getting the wheels out to run on 2 m wide beds. That took a little work, but it’s now all go.

This project is a collaboration with Plant and Food Research for OnionsNZ with support from the MPI Sustainable Farming Fund.

LandWISE 2017: Are we ready for automation?

In 2017 our 15th Annual Conference focuses on automated tools for data collection, decision making and doing actual tasks on the farm (and beyond).

  • What do you want?
  • What’s on offer?
  • How will farms and management have to change?

We have a comprehensive programme. We’ve gone a bit outside the box to bring a variety including from outside the horticultural and arable sectors. We find cross-pollination and hybrid vigour valuable!

So register, come along and listen to excellent presenters, discuss the ideas with colleagues and go away with new understanding and plans.

Thanks to Our Loyal Platinum Sponsors!
Many thanks to AGMARDT, sponsors of our international presenter, Thibault Delcroix, France

Hawke’s Bay Regional Council, John Deere and BASF Crop Protection are our Platinum Sponsors again in 2017. Many thanks to these loyal supporters who have backed the Conference for a number of years.

We also welcome our Gold Sponsors, meal sponsors and  trade displays new and old. These are the organisations that make conferences like this possible and affordable.

Join them and us at the Havelock North Function Centre on 24-25 May 2017 to mix with leading practitioners, farmers, growers, researchers, technology developers and providers.

Register now – click here!


Benchmarking Onion Variability 2016-17

Now in year two of our OnionsNZ SFF project, we have trials at the MicroFarm and monitoring sites at three commercial farms in Hawke’s Bay and three more in Pukekohe.


A summary of Year 1 is on our website. A key aspect was testing a range of sensors and camera systems for assessing crop size and variability. Because onions are like needles poking from the ground, all sensors struggled especially when plants were small. This is when we want to know about the developing crop, as it is the time we make decisions and apply management.

By November our sensing was more satisfactory. At this stage we captured satellite, UAV, smartphone and GreenSeeker data and created a series of maps. 

We used the satellite image  to create canopy maps and identify zones. We sampled within the zones at harvest, and used the raltioship between November canopy and February yield to create yield maps and profit maps.

Yield assessments show considerable variation, limits imposed by population, growth of individual plants, or both

We also developed relationships between photographs of ground cover, laboratory measurements of fresh weight and leaf area and the final crop yield.

In reviewing the season’s worth of MicroFarm plot measurements and noticed there were areas where yield reached its potential, areas where yield was limited by population (establishment), some where yield was limited by canopy growth (development) and some by both population and development.

This observation helped us form a concept of Management Action Zones, based on population and canopy development assessments.

Management Action Zones – If population is low work for better establishment next season. If plants are small see if there is something that can be done this season


Our aims for Year 2 are on the website. We set out to confirm the relationships we found in Year 1.

This required developing population expectations and determining estimates of canopy development as the season progressed, against which field measurement could be compared.

We had to select our “zones” before the crop got established as we did a lot of base line testing of the soil. So our zones were chosen based on paddock history and a fair bit of guess work. Really, we need to be able to identify zones within an establishing or developing crop, then determine what is going on so we can try to fix it as quickly as possible.

In previous seasons we experimented with smartphone cameras and image processing to assess canopy size and relate that to final yields. We are very pleased that photographs of sampling plots processed using the “Canopeo” app compare very well with Leaf Area Index again this season.

Through the season we tracked crop development in the plots and using plant counts and canopy cover assessments to try and separate the effects of population (establishment) and soil or other management factors.

We  built a web calculator to do the maths, aiming for a tool any grower or agronomist can use to aid decision making. The web calculator was used to test our theories about yield prediction and management zones.

ASL Software updated the “CoverMap” smartphone application and we obtained consistent results from it. The app calculates canopy ground cover and logs data against GPS position in real time. Because we have confidence that ground cover from image processing is closely related to Leaf Area Index we are working to turn our maps into predictions of final yields.

Maps of canopy cover created from the CoverMap smartphone application show significant variability across the paddock. Canopy increase is seen over time in two maps created a week apart

The current season’s MicroFarm crop is certainly variable. Some is deliberate: we sat the irrigator over some areas after planting to simulate heavy rain events, and we have a poorly irrigated strip. We know some relates to different soil and cover crop histories.

But some differences are unexpected and so far reasons unexplained.

Wide variation within the area new to onions does not follow artificial rain or topographic drainage patterns. This photo is of the area shown far right in the cover maps above.

Together with Plant and Food Research we have been taking additional soil samples to try and uncover the causes of patchiness.

We’ve determined one factor is our artificial rain storm, some crop loss is probably runoff from that and some is historic compaction.  We’ve even identified where a shift in our GPS AB line has left 300mm strips of low production where plants are on last year’s wheel tracks!

But there is a long way to go before this tricky crop gives up its secrets.

This project is in collaboration with Plant and Food Research and is funded by OnionsNZ and the MPI Sustainable Farming Fund.

We also appreciate the support of growers, seed companies and our MicroFarm sponsors Ballance AgriNutrients, BASF Crop Protection and the Centre for Land and Water.


MicroFarm Update

Ballance AgriNutrients and BASF Crop Protection have continued their sponsorship of the LandWISE MicroFarm for 2016-17 and 2017-18. The MicroFarm is hosted by the Centre for Land and Water which provides fields, sheds, equipment and the Green Shed venue for our meetings and seminars. We greatly appreciate their very significant contributions which make the operation possible.

Mark Redshaw put hours into getting the MicroFarm up and running and spending much of his free-time spraying and monitoring onions for two seasons. Now we have our own small sprayer we have taken that task over, but remain most grateful to Mark.

Special thanks also to Mel at HydroServices for irrigation monitoring, Patrick Nicolle for machinery support, BioRich for lending us a tractor, Hugh Ritchie for his irrigator, FruitFed Supplies for crop protection support, Scott Lawson for seed and machinery, Vigour Seeds and SPS for onion seed and McCain Foods for process crop support.

After a number of years of constant pea crops, we are having a break. Our main focus this season has been on onions, crop variability and its drivers. We have plenty of variability, but which factors are driving still proves elusive.

Aerial view of the MicroFarm taken by DJI Phantom showing replicated soil amendment plots on right, flagged replicated plots in onion zones on left, and at far left drought stressed onion beds, the reason we extended the irrigator

In conjunction with OnionsNZ and Plant & Food,
we held a grower field day in January to discuss the OnionsNZ SFF project.

We do know topography and drainage are critical factors but they do not explain all the variation we are seeing. To assess their impact, we deliberately applied “heavy rain” to some areas and have been comparing these with areas not subjected to a hard40+mm rain event before emergence.

Artificial heavy rain event applied after planting and before emergence

We prepared an OptiSurface plan two years ago but did not implement it as we were keen to explore variation in our onions trials. Perhaps it is time to act on our own advice!

Topomap created from a Trimble RTK GPS survey shows relative elevations. Yellow highest, purple lowest. Surface flow analysis of topographic maps like this show where water can become trapped and pond.
OptiSurface analysis shows where water will pond. In this image, the beds are assumed to be 100mm high. The brown areas will drain, blue and purple areas will have ponding – pale blue least, dark purple most.

The other main crop this season is sweetcorn. We are hosting a series of variety trials and are assessing a soil amendment product to see if it offers an economic advantage to growers.

To assess the soil amendment we set up a six plot replicated trial – with and without the treatment. We randomly split plots to avoid bias, and are taking crop development data through the season. At harvest we will determine paddock yield and the recovery rate of kernels in each plot.

A randomised six plot trial layout for assessing the effect of a soil amendment on a sweetcorn crop. Yellow lines imposed on aerial image from consumer UAV.

Onion Crop Development

The crop at the MicroFarm is showing increasing variability.  The cause of some is understood, essentially excessive water pre-germination.  But in some poor performing areas the causes have yet to be determined.

The effect of our artificially applied rain event pre-emergence is clearly evident in late November.

The lasting effect of a heavy (artificial) rain event pre-emergence (right panel) shows low population and poor growth compared to areas without heavy rain (left panel)
The lasting effect of a heavy (artificial) rain event pre-emergence (right panel) shows low population and poor growth compared to areas without heavy rain (left panel)

However, we also see other areas that have poor crop development that are outside the area irrigated to create the artificial rain event.

Wide variation within the area new to onions does not follow artificial rain or topographic drainage patterns.
Wide variation within the area new to onions does not follow artificial rain or topographic drainage patterns.

Sharp differences in crop growth are evident in the new onion ground. Some parts that were heavily irrigated to simulate heavy rain show reasonable development. Areas that were not irrigated also show good development, but in some patches total crop loss.

Investigations of soil physical properties in these different areas are underway.

Onion Crop Research Plan

After identifying areas within paddocks that had yields limited by different probably causes, we conceived the idea of Management Action Zones (MAZs).

Yield assessments show considerable variation, limits imposed by population, growth of individual plants, or both
Yield assessments show considerable variation, limits imposed by population, growth of individual plants, or both

Some areas showed that yield was limited by plant number: establishment was poor. Others had the expected population, but low biomass: the plants were small due to some other limiting factor.

If we can identify zones easily, and determine the causes, we should be able to target a management response accordingly. So for this season, we set out a revised research aim.

What we want to know:

  • Can we successfully determine a management action zone in a field?

Why do we need to know this?

  • Develop a tool to increase uniformity and yield outcomes
  • Develop a tool to evaluate management practices and crop productivity

If we want to successfully determine a management action zone in a field then there are two main steps to achieve in this year’s work:

  • Confirm the relationship between digital data and crop model parameters
    • Does the relationship stay constant over time and sites?
    • How early in growth can a difference be detected?
    • Can the relationship be used to show a growth map across a field?
  • Develop an approach to gather information and ways to input and display results, initially using a website approach.
    • Can we integrate a plant count and yield information to start developing a management action zone?
    • How should this be put together in a way growers can start to use to gather information about their crops?

At the MicroFarm, we established six research zones based on paddock history and excessive wetness at establishment.

We have three paddock histories: two years of onion production with autumn cover crops of Caliente mustard, two years of onion production with autumn cover crops of oats, and no previous onion crops planted after previous summer sweetcorn and autumn sown rye grass. In each of these areas, we deliberately created sub-zones  by applying about 45mm of spray irrigation as a “large rain event”.

Artificial heavy rain event applied after planting and before emergence
Artificial heavy rain event applied after planting and before emergence

The impact of the artificial rainstorm is evident on images taken at the end of November.

The lasting effect of a heavy (artificial) rain event pre-emergence (right panel) shows low population and poor growth compared to areas without heavy rain (left panel)
The lasting effect of a heavy (artificial) rain event pre-emergence (right panel) shows low population and poor growth compared to areas without heavy rain (left panel)

Onion Crops Sown

As part of our ongoing research project with Onions New Zealand, a new crop was sown on 6 September 2016.

Sowing onion seed at the MicroFarm
Sowing onion seed at the MicroFarm

Harvey from G & J Steenkamer planted the crop using Rhinestone seed donated by Vigour Seeds and treated for us by Seed and Field Services. We are very grateful for their continuing support.

We’ve aimed at a population of 580,000 plants/ha. With 8 rows in our 1.82m wide beds, we have seed at 72mm spacing in the row.

G& J Steenkamer sowing our onion crop.

After last harvest the beds, but not wheel tracks, were ripped to 450mm depth.  Autumn planted Caliente and oat cover crops were mulched and incorporated in late June and the ground left fallow.  Prior to sowing it was hoed and rolled.

Rain after planting had only minor impact, with a little soil capping in some areas.


Mapping Onion Canopies

Investigating Technologies to Map Onion Crop Development



Dan Bloomer and Justin PishiefCentre for Land and Water


The OnionsNZ/SFF Project “Benchmarking Variability in Onion Crops” is investigating technologies to map onion crop development. The purpose is to better understand variability and to gather information to inform tactical and strategic decision making.

An AgriOptics survey provided a Soil EM map of the MicroFarm which was used as a base data layer and helped select positions for Plant & Food’s research plots.

As the crop developed, repeated canopy surveys used a GreenSeeker NDVI sensor and CoverMap, a Smartphone application. Both were mounted side by side on a tractor fitted with sub-metre accuracy GPS.  Altus UAS provided UAV survey data including MicaSense imagery with five colour bands captured. A mid-season 0.5 m pixel NDVI satellite image was captured.

Both ground based systems had difficulty recording very small plants. GreenSeeker data were dominated by soil effects until a significant canopy was present. Once plants could be seen in photographs, the CoverMap system was able to distinguish between plants and soil.

Direct photos of Plant & Food plots were processed to calculate apparent ground cover. A very strong relationship was found between these and actual plant measurements of fresh leaf weight and leaf area index – both strongly correlated to final crop size.

Attempts to directly correlate the map layers with Plant & Food field plot measurements were frustrated by inadequate or inaccurate image location. Onion crops have been found highly variable over small distances. The GreenSeeker only records a reading every four or five metres, and CoverMap about every 1.5 m. Compounded by errors of a metre or more, finding a measurement to match a 0.5 m bed plot was not possible. Similarly, the UAV and satellite images, while able to identify plots, did not initially show correlations.

Using ArcGIS, fishnets were constructed over the various canopy data layers and correlations between them found at 5 m and 10 m grids. The 10 m grid appears to collect enough data points even for the GreenSeeker to provide a reasonable if not strong correlation with other canopy layers.  Similar processes are being used to compare soil and canopy data.

After one season of capture, there appears to be merit in using an optical canopy cover assessment as plants develop. Once full canopy is achieved, the NDVI or a similar index may be better. Colour image analysis will be tested as a method of recording crop top-down as a measure of maturity and storage potential.

We were not successful in mapping yield directly, but did identify a process for creating a yield map based on earlier crop canopy data.